Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
APOC3P02656 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC3P02656 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 AL355075.4-201ENST00000554988 638 ntBASIC11.31□□□□□ -0.6
APOC3P02656 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 MIR5100-201ENST00000579544 119 ntBASIC11.31□□□□□ -0.6
APOC3P02656 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 MIR5787-201ENST00000611784 55 ntBASIC11.31□□□□□ -0.6
APOC3P02656 CR392039.2-201ENST00000623182 509 ntBASIC11.31□□□□□ -0.6
APOC3P02656 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC3P02656 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 SALL4P5-201ENST00000419001 1760 ntBASIC11.31□□□□□ -0.6
APOC3P02656 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
APOC3P02656 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC3P02656 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.3□□□□□ -0.6
APOC3P02656 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC3P02656 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
APOC3P02656 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
APOC3P02656 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC3P02656 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms