Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 FAM58DP-201ENST00000428076 619 ntBASIC12.71□□□□□ -0.37
APOA1P02647 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 AC040169.1-201ENST00000565382 521 ntBASIC12.71□□□□□ -0.37
APOA1P02647 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOA1P02647 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APOA1P02647 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOA1P02647 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.71□□□□□ -0.38
APOA1P02647 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.71□□□□□ -0.38
APOA1P02647 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.71□□□□□ -0.38
APOA1P02647 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
APOA1P02647 AC003102.2-201ENST00000589195 1469 ntBASIC12.71□□□□□ -0.38
APOA1P02647 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
APOA1P02647 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
APOA1P02647 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
APOA1P02647 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.71□□□□□ -0.38
APOA1P02647 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOA1P02647 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 AL138799.1-201ENST00000448213 1675 ntBASIC12.7□□□□□ -0.38
APOA1P02647 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 ZNF259P1-201ENST00000407656 1365 ntBASIC12.7□□□□□ -0.38
APOA1P02647 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 MED15P5-201ENST00000423150 992 ntBASIC12.7□□□□□ -0.38
APOA1P02647 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
APOA1P02647 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 KRT18P56-201ENST00000507275 550 ntBASIC12.7□□□□□ -0.38
APOA1P02647 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 AC131206.1-201ENST00000538078 1211 ntBASIC12.7□□□□□ -0.38
APOA1P02647 AC027601.4-201ENST00000611259 610 ntBASIC12.7□□□□□ -0.38
APOA1P02647 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.7□□□□□ -0.38
APOA1P02647 FAM197Y3-203ENST00000618346 717 ntBASIC12.7□□□□□ -0.38
APOA1P02647 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 AC073335.2-201ENST00000610177 3441 ntBASIC12.7□□□□□ -0.38
APOA1P02647 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOA1P02647 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.7□□□□□ -0.38
APOA1P02647 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOA1P02647 ABCD1P2-201ENST00000429313 1601 ntBASIC12.7□□□□□ -0.38
APOA1P02647 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOA1P02647 LINC00638-201ENST00000555578 2518 ntBASIC12.69□□□□□ -0.38
APOA1P02647 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOA1P02647 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOA1P02647 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOA1P02647 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
APOA1P02647 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOA1P02647 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms