Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 AF186996.6-201ENST00000485294 149 ntBASIC14.99□□□□□ -0.01
TIMP1P01033 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC14.99□□□□□ -0.01
TIMP1P01033 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.99□□□□□ -0.01
TIMP1P01033 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TIMP1P01033 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.99□□□□□ -0.01
TIMP1P01033 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.99□□□□□ -0.01
TIMP1P01033 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMP1P01033 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.98□□□□□ -0.01
TIMP1P01033 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TIMP1P01033 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 HSD3BP1-201ENST00000286193 1111 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 SNORD88B-201ENST00000408454 91 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 DNM1P46-202ENST00000415963 882 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 SDCBP2P1-201ENST00000416115 614 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 AC022447.5-201ENST00000504817 392 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 AC133555.4-201ENST00000569081 152 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMP1P01033 AL590556.2-202ENST00000636906 844 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
TIMP1P01033 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TIMP1P01033 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMP1P01033 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 NRADDP-202ENST00000641269 1585 ntBASIC14.98□□□□□ -0.01
TIMP1P01033 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMP1P01033 TCAF2P1-201ENST00000291129 2421 ntBASIC14.97□□□□□ -0.01
TIMP1P01033 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMP1P01033 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMP1P01033 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms