Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.26□□□□□ -0.13
SMAD6O43541 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 TBC1D27-202ENST00000424239 1573 ntBASIC14.26□□□□□ -0.13
SMAD6O43541 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SMAD6O43541 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMAD6O43541 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 AC138761.6-201ENST00000583997 1423 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 Z69890.1-201ENST00000382990 339 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
SMAD6O43541 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.25□□□□□ -0.13
SMAD6O43541 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 OR5BD1P-201ENST00000532527 817 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 IQSEC3P1-201ENST00000538799 536 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.25□□□□□ -0.13
SMAD6O43541 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.25□□□□□ -0.13
SMAD6O43541 MIR5572-201ENST00000583188 137 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 AC107464.3-201ENST00000609172 737 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 COX6A1P2-201ENST00000620597 330 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 KRT8P24-201ENST00000560290 1559 ntBASIC14.25□□□□□ -0.13
SMAD6O43541 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SMAD6O43541 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SMAD6O43541 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.25□□□□□ -0.13
SMAD6O43541 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMAD6O43541 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.24□□□□□ -0.13
SMAD6O43541 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 AC097376.2-205ENST00000610159 5334 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.24□□□□□ -0.13
SMAD6O43541 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMAD6O43541 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 AC015909.5-201ENST00000624336 2266 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMAD6O43541 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms