Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 HLA-DPA2-205ENST00000433582 733 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ASS1P2-201ENST00000439895 1223 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC025186.1-201ENST00000478174 870 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC083801.1-201ENST00000491689 358 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC093300.1-201ENST00000510368 1201 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC022447.6-201ENST00000515522 438 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC005777.1-201ENST00000588332 187 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 KRT8P43-201ENST00000406052 1458 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC004554.1-201ENST00000422830 1468 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TBC1D27-202ENST00000424239 1573 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC138761.6-201ENST00000583997 1423 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 ABCD1P4-201ENST00000399687 604 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 KRT18P37-201ENST00000520711 1282 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AL139339.2-201ENST00000608063 657 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC097376.2-205ENST00000610159 5334 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AL365181.1-201ENST00000564032 1828 ntBASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCDC187A0A096LP49 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms