Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AL512306.1-201ENST00000432698 848 ntBASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 COX6A1P2-201ENST00000620597 330 ntBASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.21■□□□□ 0.35
HMG20BQ9P0W2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.21■□□□□ 0.34
HMG20BQ9P0W2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
HMG20BQ9P0W2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 HMGA1P1-201ENST00000415560 1062 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 RPSAP31-201ENST00000416648 895 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 PPP1R2P4-201ENST00000424051 595 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 KLF17P1-201ENST00000547105 1126 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 BAP1-211ENST00000615113 489 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 AC011491.1-203ENST00000637688 543 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 AL157996.1-201ENST00000624684 2299 ntBASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.2■□□□□ 0.34
HMG20BQ9P0W2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms