Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.07■□□□□ 0
CD248Q9HCU0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
CD248Q9HCU0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 VENTXP1-201ENST00000569334 2716 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC011742.3-201ENST00000439053 820 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 KLF2P1-201ENST00000447438 1042 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 RPL18P13-201ENST00000478088 569 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC106794.1-201ENST00000506935 792 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.06■□□□□ 0
CD248Q9HCU0 AL161670.2-201ENST00000557650 1227 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.06■□□□□ 0
CD248Q9HCU0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 AC132192.2-201ENST00000596206 1147 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 AC090164.2-201ENST00000611487 516 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 AP000346.4-201ENST00000614827 381 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.06■□□□□ 0
CD248Q9HCU0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 AC073548.1-201ENST00000624088 1882 ntBASIC15.06■□□□□ 0
CD248Q9HCU0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD248Q9HCU0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CD248Q9HCU0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.05■□□□□ 0
CD248Q9HCU0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CD248Q9HCU0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.05■□□□□ 0
CD248Q9HCU0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD248Q9HCU0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CD248Q9HCU0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.05■□□□□ -0
CD248Q9HCU0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.05■□□□□ -0
CD248Q9HCU0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.05■□□□□ -0
CD248Q9HCU0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CD248Q9HCU0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.05■□□□□ -0
CD248Q9HCU0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.05■□□□□ -0
CD248Q9HCU0 HLA-J-204ENST00000495278 958 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 AC125604.1-201ENST00000496255 707 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 NUP210P1-202ENST00000504322 710 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 AC134698.3-201ENST00000523880 214 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CD248Q9HCU0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.05■□□□□ -0
CD248Q9HCU0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.05■□□□□ -0
CD248Q9HCU0 AC100827.2-201ENST00000563214 1194 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 MIR497HG-202ENST00000572453 3838 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 AL133499.1-201ENST00000596207 608 ntBASIC15.05■□□□□ -0
CD248Q9HCU0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.05■□□□□ -0
CD248Q9HCU0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CD248Q9HCU0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
CD248Q9HCU0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CD248Q9HCU0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CD248Q9HCU0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.05■□□□□ -0
CD248Q9HCU0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.05■□□□□ -0
CD248Q9HCU0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms