Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.47□□□□□ -0.09
PHACTR1Q9C0D0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 FTH1P14-201ENST00000482930 551 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 SLC25A47P1-201ENST00000531577 414 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 MIR3197-201ENST00000582241 73 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 Z98259.2-201ENST00000641583 609 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 E2F3P2-201ENST00000447755 1422 ntBASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PHACTR1Q9C0D0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 AC244394.1-201ENST00000435000 1665 ntBASIC14.46□□□□□ -0.1
PHACTR1Q9C0D0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AC004623.1-201ENST00000624592 2127 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 CNN2P10-201ENST00000443067 918 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 HIST2H2BB-201ENST00000449108 381 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms