Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.86□□□□□ -0.67
VGLL1Q99990 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.86□□□□□ -0.67
VGLL1Q99990 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 CICP12-201ENST00000455801 843 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.86□□□□□ -0.67
VGLL1Q99990 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 SPCS2P1-201ENST00000561636 679 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 AC135782.3-201ENST00000562782 2105 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.86□□□□□ -0.67
VGLL1Q99990 MIR5189-201ENST00000577370 114 ntBASIC10.86□□□□□ -0.67
VGLL1Q99990 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.86□□□□□ -0.67
VGLL1Q99990 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
VGLL1Q99990 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VGLL1Q99990 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VGLL1Q99990 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 ANKRD30BP2-201ENST00000435744 1610 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 FAM8A4P-201ENST00000435433 1213 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 AL590640.2-201ENST00000457038 527 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 AP003171.2-201ENST00000528208 925 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
VGLL1Q99990 AC010319.3-201ENST00000597028 470 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 AC027601.3-201ENST00000622907 509 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 RPSAP52-203ENST00000622976 1023 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 AC132938.4-201ENST00000623835 848 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms