Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 RNA5SP359-201ENST00000364838 113 ntBASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 BRWD1P1-201ENST00000401091 371 ntBASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AC005740.1-201ENST00000515639 522 ntBASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AL139424.3-202ENST00000641619 917 ntBASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 OR8T1P-201ENST00000421347 918 ntBASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 DUX4L50-201ENST00000455245 715 ntBASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AL645939.5-201ENST00000606834 243 ntBASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AC100757.4-201ENST00000626934 759 ntBASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM5Q96HC4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms