Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 HLA-A-201ENST00000376802 1334 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S1Q92572 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S1Q92572 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S1Q92572 FAM90A11P-201ENST00000518378 2218 ntBASIC12.56□□□□□ -0.4
AP3S1Q92572 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC025183.3-201ENST00000623526 1482 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 RNU1-114P-201ENST00000365297 166 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC023274.1-201ENST00000418278 595 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 HLA-J-203ENST00000494367 1087 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC092865.5-201ENST00000545435 363 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC138696.2-201ENST00000607376 223 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC090114.2-201ENST00000608477 7054 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S1Q92572 AC134407.3-201ENST00000624035 2139 ntBASIC12.55□□□□□ -0.4
AP3S1Q92572 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
AP3S1Q92572 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
AP3S1Q92572 KLF2P2-201ENST00000416807 1039 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 HTR5BP-201ENST00000430851 1154 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 VDAC1P7-201ENST00000462417 847 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
AP3S1Q92572 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.54□□□□□ -0.4
AP3S1Q92572 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.54□□□□□ -0.4
AP3S1Q92572 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 AL391069.4-201ENST00000609583 481 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms