Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 TEKT4P2-202ENST00000559466 1312 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 CCT8L1P-201ENST00000465400 1674 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC092638.2-201ENST00000441105 947 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC004837.1-201ENST00000446267 564 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 SIGLEC22P-201ENST00000599104 714 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AL133467.4-201ENST00000602953 725 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AL591122.2-201ENST00000624125 1853 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 AC067931.2-201ENST00000623655 2003 ntBASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHKBP1Q8TBC3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 RN7SKP109-201ENST00000410592 316 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 DPY19L2P5-201ENST00000456300 331 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC022447.6-201ENST00000515522 438 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 NDUFB10P1-201ENST00000567319 521 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC007952.4-201ENST00000573866 637 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AP000322.3-201ENST00000608665 388 ntBASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms