Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 KRT8P28-201ENST00000433288 1390 ntBASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLDND2Q8NHS1 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 CEP164P1-201ENST00000455142 418 ntBASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TPT1P11-201ENST00000458482 498 ntBASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AC128714.1-201ENST00000637035 887 ntBASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AC009093.10-201ENST00000641956 1442 ntBASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLDND2Q8NHS1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 FRMPD2B-201ENST00000431305 1347 ntBASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 TBC1D3J-201ENST00000620719 1426 ntBASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 XBP1P1-201ENST00000436573 652 ntBASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.15□□□□□ -0.46
CLDND2Q8NHS1 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms