Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RN7SL181P-201ENST00000462921 277 ntBASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 LINC00265-2P-201ENST00000413372 782 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PPP1R2P4-201ENST00000424051 595 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AL512306.1-201ENST00000432698 848 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ORAOV1P1-201ENST00000503108 395 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 MIR5572-201ENST00000583188 137 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AC092171.5-201ENST00000608012 942 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AC087392.5-201ENST00000612517 489 ntBASIC15.23■□□□□ 0.03
BEST2Q8NFU1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
BEST2Q8NFU1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC006372.4-201ENST00000624122 1543 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms