Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 AC004840.1-201ENST00000636359 365 ntBASIC12.35□□□□□ -0.43
BEST4Q8NFU0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 Z98257.2-202ENST00000641138 1548 ntBASIC12.35□□□□□ -0.43
BEST4Q8NFU0 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BEST4Q8NFU0 AC009474.1-201ENST00000455096 1565 ntBASIC12.35□□□□□ -0.43
BEST4Q8NFU0 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC004967.1-201ENST00000453589 447 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 FO681548.1-201ENST00000455617 1132 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC023310.3-201ENST00000557027 670 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC100756.1-201ENST00000562736 682 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 RRP7BP-205ENST00000566851 833 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC138749.3-201ENST00000567691 622 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC008738.7-201ENST00000609744 511 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC116165.1-201ENST00000611806 668 ntBASIC12.34□□□□□ -0.43
BEST4Q8NFU0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BEST4Q8NFU0 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.33□□□□□ -0.43
BEST4Q8NFU0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
BEST4Q8NFU0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.33□□□□□ -0.44
BEST4Q8NFU0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms