Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AC073869.1-201ENST00000415574 2762 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AL590824.1-201ENST00000403828 1349 ntBASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TTC9CQ8N5M4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC092580.1-201ENST00000433998 658 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AK2P2-201ENST00000439142 405 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC106794.1-201ENST00000506935 792 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AL359881.2-201ENST00000602973 570 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC092299.1-201ENST00000632679 757 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC068587.8-201ENST00000641239 219 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 AC023794.5-201ENST00000564380 2157 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SHMT1P1-201ENST00000419974 1312 ntBASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
TTC9CQ8N5M4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 CSPG4P11-201ENST00000560634 4910 ntBASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms