Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC005274.1-201ENST00000623460 802 ntBASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 HSPA8P5-201ENST00000456928 2069 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 OR10N1P-201ENST00000392758 869 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ABCD1P4-201ENST00000399687 604 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ACTBP14-201ENST00000411655 1089 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AL929302.1-201ENST00000426556 871 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AL451000.1-201ENST00000451300 1186 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AC092903.1-201ENST00000466506 262 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AC005777.1-201ENST00000588332 187 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AC018695.6-201ENST00000614011 534 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AC026336.4-201ENST00000624565 1050 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 FKBP4P8-201ENST00000610931 1369 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 PES1P2-201ENST00000449745 1735 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 AP001267.2-201ENST00000532619 2086 ntBASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM71Q2Q1W2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC022080.1-201ENST00000366255 781 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AL080243.1-201ENST00000423293 1060 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 RN7SL288P-201ENST00000490496 291 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 BAK1P2-201ENST00000532665 631 ntBASIC15.3■□□□□ 0.04
TRIM71Q2Q1W2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms