Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 U73169.1-201ENST00000395152 367 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 RPL29P2-201ENST00000488409 460 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AL359219.1-201ENST00000556311 934 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 EMP3-204ENST00000596315 761 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 MIEF1-215ENST00000637854 213 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 MIR632-201ENST00000385193 94 ntBASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 OR2W2P-201ENST00000406313 909 ntBASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 AC103563.1-201ENST00000429316 123 ntBASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ZNF877P-201ENST00000437614 612 ntBASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 AC022121.1-201ENST00000484584 579 ntBASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO4Q2I0M5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC023157.3-201ENST00000619086 2088 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms