Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 AC133555.4-201ENST00000569081 152 ntBASIC20.28■□□□□ 0.84
ATP7AQ04656 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP7AQ04656 AP000553.2-201ENST00000609038 441 ntBASIC20.28■□□□□ 0.84
ATP7AQ04656 PSME2-217ENST00000615264 874 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP7AQ04656 PSME2-218ENST00000630027 185 ntTSL 3 BASIC20.28■□□□□ 0.84
ATP7AQ04656 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC20.28■□□□□ 0.84
ATP7AQ04656 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP7AQ04656 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP7AQ04656 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ATP7AQ04656 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATP7AQ04656 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP7AQ04656 DDC-212ENST00000615193 1674 ntTSL 3 BASIC20.28■□□□□ 0.84
ATP7AQ04656 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
ATP7AQ04656 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 CRIP1P2-201ENST00000425396 228 ntBASIC20.27■□□□□ 0.84
ATP7AQ04656 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 RPSAP16-201ENST00000447583 821 ntBASIC20.27■□□□□ 0.84
ATP7AQ04656 YBX1P3-201ENST00000468366 909 ntBASIC20.27■□□□□ 0.84
ATP7AQ04656 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP7AQ04656 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP7AQ04656 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC20.27■□□□□ 0.84
ATP7AQ04656 AL137028.2-201ENST00000614601 256 ntBASIC20.27■□□□□ 0.84
ATP7AQ04656 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP7AQ04656 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATP7AQ04656 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP7AQ04656 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP7AQ04656 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP7AQ04656 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP7AQ04656 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP7AQ04656 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP7AQ04656 SNORD88B-201ENST00000408454 91 ntBASIC20.27■□□□□ 0.83
ATP7AQ04656 KRT18P42-201ENST00000505048 1255 ntBASIC20.27■□□□□ 0.83
ATP7AQ04656 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC20.27■□□□□ 0.83
ATP7AQ04656 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC20.27■□□□□ 0.83
ATP7AQ04656 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ATP7AQ04656 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP7AQ04656 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.27■□□□□ 0.83
ATP7AQ04656 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ATP7AQ04656 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP7AQ04656 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP7AQ04656 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.26■□□□□ 0.83
ATP7AQ04656 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP7AQ04656 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP7AQ04656 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 AP001331.1-201ENST00000413008 1015 ntBASIC20.26■□□□□ 0.83
ATP7AQ04656 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP7AQ04656 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP7AQ04656 FAM86JP-202ENST00000484500 988 ntBASIC20.26■□□□□ 0.83
ATP7AQ04656 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP7AQ04656 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.26■□□□□ 0.83
ATP7AQ04656 CDC37P2-201ENST00000562287 1029 ntBASIC20.26■□□□□ 0.83
ATP7AQ04656 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP7AQ04656 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP7AQ04656 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP7AQ04656 MIR6125-201ENST00000618986 96 ntBASIC20.26■□□□□ 0.83
ATP7AQ04656 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms