Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 SLC25A24P2-201ENST00000415059 510 ntBASIC13.53□□□□□ -0.24
SKP1P63208 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.53□□□□□ -0.24
SKP1P63208 CHCHD2P2-201ENST00000503744 321 ntBASIC13.53□□□□□ -0.24
SKP1P63208 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.53□□□□□ -0.24
SKP1P63208 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 AC008132.1-202ENST00000342005 1389 ntBASIC13.53□□□□□ -0.24
SKP1P63208 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SKP1P63208 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.53□□□□□ -0.24
SKP1P63208 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SKP1P63208 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.24
SKP1P63208 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SKP1P63208 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SKP1P63208 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SKP1P63208 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SKP1P63208 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.52□□□□□ -0.24
SKP1P63208 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SKP1P63208 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.52□□□□□ -0.25
SKP1P63208 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 BCYRN1-201ENST00000418539 200 ntBASIC13.52□□□□□ -0.25
SKP1P63208 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.52□□□□□ -0.25
SKP1P63208 AC245884.6-201ENST00000515672 1067 ntBASIC13.52□□□□□ -0.25
SKP1P63208 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.52□□□□□ -0.25
SKP1P63208 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.52□□□□□ -0.25
SKP1P63208 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SKP1P63208 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.52□□□□□ -0.25
SKP1P63208 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.52□□□□□ -0.25
SKP1P63208 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SKP1P63208 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SKP1P63208 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SKP1P63208 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms