Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.46□□□□□ -0.09
CDH4P55283 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH4P55283 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 FTLP1-201ENST00000449155 526 ntBASIC14.46□□□□□ -0.09
CDH4P55283 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.46□□□□□ -0.09
CDH4P55283 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH4P55283 KLF17P1-201ENST00000547105 1126 ntBASIC14.46□□□□□ -0.09
CDH4P55283 AC138701.2-201ENST00000553634 226 ntBASIC14.46□□□□□ -0.09
CDH4P55283 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 AC145285.5-201ENST00000562217 361 ntBASIC14.46□□□□□ -0.09
CDH4P55283 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH4P55283 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.46□□□□□ -0.09
CDH4P55283 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.46□□□□□ -0.09
CDH4P55283 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.46□□□□□ -0.09
CDH4P55283 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 AC009145.4-201ENST00000625119 1294 ntBASIC14.46□□□□□ -0.09
CDH4P55283 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH4P55283 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 SNX18-202ENST00000343017 3140 ntBASIC14.46□□□□□ -0.09
CDH4P55283 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 KRT8P18-201ENST00000413425 1445 ntBASIC14.46□□□□□ -0.09
CDH4P55283 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
CDH4P55283 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH4P55283 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH4P55283 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH4P55283 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH4P55283 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH4P55283 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH4P55283 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH4P55283 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.45□□□□□ -0.1
CDH4P55283 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH4P55283 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.45□□□□□ -0.1
CDH4P55283 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH4P55283 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH4P55283 AC018638.5-201ENST00000450885 754 ntBASIC14.45□□□□□ -0.1
CDH4P55283 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH4P55283 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDH4P55283 AC130709.1-201ENST00000484779 1212 ntBASIC14.45□□□□□ -0.1
CDH4P55283 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH4P55283 ORAOV1P1-201ENST00000503108 395 ntBASIC14.45□□□□□ -0.1
CDH4P55283 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH4P55283 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH4P55283 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH4P55283 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH4P55283 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDH4P55283 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 AC128714.1-201ENST00000637035 887 ntBASIC14.45□□□□□ -0.1
CDH4P55283 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 AL928921.2-201ENST00000641325 2442 ntBASIC14.45□□□□□ -0.1
CDH4P55283 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH4P55283 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH4P55283 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH4P55283 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH4P55283 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH4P55283 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH4P55283 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH4P55283 AC092053.3-201ENST00000641308 4975 ntBASIC14.44□□□□□ -0.1
CDH4P55283 AC074138.1-201ENST00000611182 1303 ntBASIC14.44□□□□□ -0.1
CDH4P55283 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms