Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC073352.2-201ENST00000609385 439 ntBASIC13.09□□□□□ -0.31
RFC3P40938 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.09□□□□□ -0.31
RFC3P40938 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RFC3P40938 AC051619.9-201ENST00000623237 597 ntBASIC13.09□□□□□ -0.31
RFC3P40938 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RFC3P40938 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.09□□□□□ -0.31
RFC3P40938 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
RFC3P40938 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.09□□□□□ -0.31
RFC3P40938 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RFC3P40938 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.09□□□□□ -0.31
RFC3P40938 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RFC3P40938 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFC3P40938 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RFC3P40938 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RFC3P40938 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFC3P40938 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RFC3P40938 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RFC3P40938 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RFC3P40938 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RFC3P40938 AC026316.1-201ENST00000398900 414 ntBASIC13.08□□□□□ -0.32
RFC3P40938 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
RFC3P40938 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 AL592076.1-201ENST00000424448 303 ntBASIC13.08□□□□□ -0.32
RFC3P40938 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.08□□□□□ -0.32
RFC3P40938 RN7SL181P-201ENST00000462921 277 ntBASIC13.08□□□□□ -0.32
RFC3P40938 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 ALG1L13P-202ENST00000519320 584 ntBASIC13.08□□□□□ -0.32
RFC3P40938 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.08□□□□□ -0.32
RFC3P40938 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.08□□□□□ -0.32
RFC3P40938 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 AC103810.10-201ENST00000606504 343 ntBASIC13.08□□□□□ -0.32
RFC3P40938 AL591471.1-201ENST00000621855 229 ntBASIC13.08□□□□□ -0.32
RFC3P40938 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RFC3P40938 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.08□□□□□ -0.32
RFC3P40938 AC074138.1-201ENST00000611182 1303 ntBASIC13.08□□□□□ -0.32
RFC3P40938 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
RFC3P40938 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RFC3P40938 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RFC3P40938 AP001267.2-201ENST00000532619 2086 ntBASIC13.08□□□□□ -0.32
RFC3P40938 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RFC3P40938 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms