Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 AC068760.1-201ENST00000493579 1953 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.26■□□□□ 0.35
PDE6BP35913 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6BP35913 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 AC103563.1-201ENST00000429316 123 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.26■□□□□ 0.35
PDE6BP35913 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 KRT19P4-201ENST00000443208 943 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 FAM187B2P-201ENST00000577135 713 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 RN7SL602P-201ENST00000578326 324 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 RN7SL718P-201ENST00000581254 303 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 NEK4P3-201ENST00000604859 544 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6BP35913 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.26■□□□□ 0.35
PDE6BP35913 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.26■□□□□ 0.35
PDE6BP35913 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6BP35913 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 USP17L6P-201ENST00000382470 1197 ntBASIC17.25■□□□□ 0.35
PDE6BP35913 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDE6BP35913 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 ZNF877P-201ENST00000437614 612 ntBASIC17.25■□□□□ 0.35
PDE6BP35913 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6BP35913 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6BP35913 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 PRMT1P1-201ENST00000604252 1009 ntBASIC17.25■□□□□ 0.35
PDE6BP35913 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDE6BP35913 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6BP35913 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 RN7SL832P-201ENST00000607781 1756 ntBASIC17.25■□□□□ 0.35
PDE6BP35913 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6BP35913 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6BP35913 FAM226B-201ENST00000602508 1490 ntBASIC17.24■□□□□ 0.35
PDE6BP35913 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6BP35913 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6BP35913 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDE6BP35913 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 AC147876.1-201ENST00000504408 322 ntBASIC17.24■□□□□ 0.35
PDE6BP35913 AC113347.2-201ENST00000512350 279 ntBASIC17.24■□□□□ 0.35
PDE6BP35913 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 RN7SL524P-201ENST00000581152 300 ntBASIC17.24■□□□□ 0.35
PDE6BP35913 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PDE6BP35913 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6BP35913 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms