Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXD12P35452 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXD12P35452 AC140658.4-201ENST00000561990 352 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 RN7SL596P-201ENST00000582123 288 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXD12P35452 AC005041.3-201ENST00000606287 649 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 AC007250.1-201ENST00000608934 338 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 IL9RP3-201ENST00000442856 1674 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXD12P35452 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXD12P35452 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 AL928921.2-201ENST00000641325 2442 ntBASIC14.25□□□□□ -0.13
HOXD12P35452 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 MIR645-201ENST00000385283 94 ntBASIC14.25□□□□□ -0.13
HOXD12P35452 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXD12P35452 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXD12P35452 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.25□□□□□ -0.13
HOXD12P35452 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.25□□□□□ -0.13
HOXD12P35452 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 NUTM2HP-201ENST00000442076 2498 ntBASIC14.25□□□□□ -0.13
HOXD12P35452 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXD12P35452 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXD12P35452 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXD12P35452 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXD12P35452 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HOXD12P35452 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms