Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.24□□□□□ -0.45
CD40P25942 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 HERC2P11-201ENST00000562845 725 ntBASIC12.24□□□□□ -0.45
CD40P25942 AC100756.2-201ENST00000569537 736 ntBASIC12.24□□□□□ -0.45
CD40P25942 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CD40P25942 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CD40P25942 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 AC009145.4-201ENST00000625119 1294 ntBASIC12.24□□□□□ -0.45
CD40P25942 AC011491.1-203ENST00000637688 543 ntBASIC12.24□□□□□ -0.45
CD40P25942 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.24□□□□□ -0.45
CD40P25942 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 RPSAP31-201ENST00000416648 895 ntBASIC12.23□□□□□ -0.45
CD40P25942 GUSBP10-201ENST00000417412 665 ntBASIC12.23□□□□□ -0.45
CD40P25942 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 PPP1R2P4-201ENST00000424051 595 ntBASIC12.23□□□□□ -0.45
CD40P25942 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.23□□□□□ -0.45
CD40P25942 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 SLC25A15P3-201ENST00000505530 290 ntBASIC12.23□□□□□ -0.45
CD40P25942 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.23□□□□□ -0.45
CD40P25942 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 NPM1P43-201ENST00000558669 786 ntBASIC12.23□□□□□ -0.45
CD40P25942 AC145285.5-201ENST00000562217 361 ntBASIC12.23□□□□□ -0.45
CD40P25942 DNM1P30-201ENST00000563586 452 ntBASIC12.23□□□□□ -0.45
CD40P25942 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.23□□□□□ -0.45
CD40P25942 RN7SL555P-201ENST00000584742 339 ntBASIC12.23□□□□□ -0.45
CD40P25942 RPL17P45-201ENST00000586289 509 ntBASIC12.23□□□□□ -0.45
CD40P25942 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.23□□□□□ -0.45
CD40P25942 MIR6842-201ENST00000612539 65 ntBASIC12.23□□□□□ -0.45
CD40P25942 MIR7845-201ENST00000618396 99 ntBASIC12.23□□□□□ -0.45
CD40P25942 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD40P25942 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.23□□□□□ -0.45
CD40P25942 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD40P25942 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.23□□□□□ -0.45
CD40P25942 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.23□□□□□ -0.45
CD40P25942 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.22□□□□□ -0.45
CD40P25942 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD40P25942 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.22□□□□□ -0.45
CD40P25942 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms