Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.02□□□□□ -0.49
COL8A2P25067 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.02□□□□□ -0.49
COL8A2P25067 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 NDUFS6P1-201ENST00000485187 316 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.02□□□□□ -0.49
COL8A2P25067 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.02□□□□□ -0.49
COL8A2P25067 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 AC005632.3-201ENST00000605544 308 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 AC087045.2-201ENST00000606279 1003 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.02□□□□□ -0.49
COL8A2P25067 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 LINC00115-201ENST00000473798 1317 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
COL8A2P25067 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
COL8A2P25067 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 LINC01815-202ENST00000641468 1409 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.02□□□□□ -0.49
COL8A2P25067 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
COL8A2P25067 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 PTENP1-202ENST00000532280 3996 ntBASIC12.01□□□□□ -0.49
COL8A2P25067 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
COL8A2P25067 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 AC098935.1-201ENST00000446057 611 ntBASIC12.01□□□□□ -0.49
COL8A2P25067 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.01□□□□□ -0.49
COL8A2P25067 AC018635.2-201ENST00000608625 364 ntBASIC12.01□□□□□ -0.49
COL8A2P25067 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 CICP17-201ENST00000418553 2377 ntBASIC12.01□□□□□ -0.49
COL8A2P25067 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
COL8A2P25067 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
COL8A2P25067 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COL8A2P25067 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 AL022313.4-201ENST00000562756 2046 ntBASIC12.01□□□□□ -0.49
COL8A2P25067 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COL8A2P25067 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
COL8A2P25067 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
COL8A2P25067 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 AC067931.2-201ENST00000623655 2003 ntBASIC12□□□□□ -0.49
COL8A2P25067 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 HSPA8P5-201ENST00000456928 2069 ntBASIC12□□□□□ -0.49
COL8A2P25067 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COL8A2P25067 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12□□□□□ -0.49
COL8A2P25067 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 270 ms