Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CHMP24386 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CHMP24386 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.37□□□□□ -0.27
CHMP24386 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.37□□□□□ -0.27
CHMP24386 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 AC243960.2-201ENST00000600996 747 ntBASIC13.37□□□□□ -0.27
CHMP24386 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 MIR6787-201ENST00000616675 61 ntBASIC13.37□□□□□ -0.27
CHMP24386 AL008638.5-201ENST00000623814 1298 ntBASIC13.37□□□□□ -0.27
CHMP24386 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.37□□□□□ -0.27
CHMP24386 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 MIR497HG-202ENST00000572453 3838 ntBASIC13.37□□□□□ -0.27
CHMP24386 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHMP24386 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.37□□□□□ -0.27
CHMP24386 AL139385.1-201ENST00000611744 3272 ntBASIC13.37□□□□□ -0.27
CHMP24386 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHMP24386 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 NCLP1-201ENST00000445357 1963 ntBASIC13.36□□□□□ -0.27
CHMP24386 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
CHMP24386 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHMP24386 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.36□□□□□ -0.27
CHMP24386 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.36□□□□□ -0.27
CHMP24386 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.36□□□□□ -0.27
CHMP24386 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.36□□□□□ -0.27
CHMP24386 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.36□□□□□ -0.27
CHMP24386 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.36□□□□□ -0.27
CHMP24386 TUBB8P8-201ENST00000458717 1058 ntBASIC13.36□□□□□ -0.27
CHMP24386 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.36□□□□□ -0.27
CHMP24386 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.36□□□□□ -0.27
CHMP24386 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CHMP24386 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.36□□□□□ -0.27
CHMP24386 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 AL118558.3-201ENST00000607414 1079 ntBASIC13.36□□□□□ -0.27
CHMP24386 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHMP24386 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms