Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
EPHA1P21709 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
EPHA1P21709 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
EPHA1P21709 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
EPHA1P21709 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 AC018735.1-201ENST00000437208 1502 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.34□□□□□ -0.43
EPHA1P21709 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 UPF3AP2-201ENST00000457924 1132 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.34□□□□□ -0.43
EPHA1P21709 OR10B1P-201ENST00000601666 907 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 AC138649.2-201ENST00000615886 705 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
EPHA1P21709 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 OR2I1P-208ENST00000641137 4948 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.34□□□□□ -0.43
EPHA1P21709 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 AL354702.1-201ENST00000442006 1960 ntBASIC12.34□□□□□ -0.43
EPHA1P21709 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.34□□□□□ -0.43
EPHA1P21709 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
EPHA1P21709 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
EPHA1P21709 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
EPHA1P21709 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
EPHA1P21709 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.33□□□□□ -0.44
EPHA1P21709 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
EPHA1P21709 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 AC073869.1-201ENST00000415574 2762 ntBASIC12.33□□□□□ -0.44
EPHA1P21709 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
EPHA1P21709 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
EPHA1P21709 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
EPHA1P21709 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
EPHA1P21709 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
EPHA1P21709 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.33□□□□□ -0.44
EPHA1P21709 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms