Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB3BP20337 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 AC061965.1-201ENST00000560524 1465 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 AL022323.5-201ENST00000624101 2059 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 TRIM80P-201ENST00000455685 2848 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 AC022144.1-201ENST00000602255 1580 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RAB3BP20337 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB3BP20337 MYCLP2-201ENST00000449268 967 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.51□□□□□ -0.41
RAB3BP20337 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 AL671883.3-201ENST00000603274 991 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 AC004790.1-201ENST00000612686 536 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB3BP20337 AC005252.2-201ENST00000624630 1141 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RAB3BP20337 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 AC108024.1-201ENST00000626286 1721 ntBASIC12.51□□□□□ -0.41
RAB3BP20337 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB3BP20337 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB3BP20337 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB3BP20337 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 SPDYE19P-201ENST00000338590 713 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 RN7SKP175-201ENST00000408472 289 ntBASIC12.5□□□□□ -0.41
RAB3BP20337 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB3BP20337 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB3BP20337 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms