Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC006987.1-201ENST00000413610 527 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ERP29P1-201ENST00000442902 706 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC018463.1-201ENST00000456674 917 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AP000911.2-201ENST00000534330 502 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AP000322.3-201ENST00000608665 388 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 MIR6858-201ENST00000620733 67 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC005618.3-201ENST00000624928 458 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC015656.1-201ENST00000624209 3578 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 AC005252.3-201ENST00000623855 2258 ntBASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB40ALP0C0E4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 CCT8L1P-201ENST00000465400 1674 ntBASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40ALP0C0E4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms