Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC8.44□□□□□ -1.06
APOBP04114 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 FAM90A27P-201ENST00000593323 1370 ntBASIC8.44□□□□□ -1.06
APOBP04114 FAM90A28P-202ENST00000597191 1374 ntBASIC8.44□□□□□ -1.06
APOBP04114 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 AKR1B1P3-201ENST00000525311 588 ntBASIC8.44□□□□□ -1.06
APOBP04114 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC8.44□□□□□ -1.06
APOBP04114 snoZ6.3-201ENST00000583496 76 ntBASIC8.44□□□□□ -1.06
APOBP04114 RBP1-206ENST00000617459 667 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 AC010335.3-201ENST00000623767 531 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC073592.10-201ENST00000624789 597 ntBASIC8.44□□□□□ -1.06
APOBP04114 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
APOBP04114 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 USP17L6P-201ENST00000382470 1197 ntBASIC8.43□□□□□ -1.06
APOBP04114 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
APOBP04114 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 RN7SL677P-201ENST00000466970 319 ntBASIC8.43□□□□□ -1.06
APOBP04114 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC8.43□□□□□ -1.06
APOBP04114 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC8.43□□□□□ -1.06
APOBP04114 CDC20P1-201ENST00000488829 1500 ntBASIC8.43□□□□□ -1.06
APOBP04114 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC8.43□□□□□ -1.06
APOBP04114 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 HNRNPA1P3-201ENST00000440968 551 ntBASIC8.43□□□□□ -1.06
APOBP04114 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC8.43□□□□□ -1.06
APOBP04114 AP001979.1-201ENST00000529222 751 ntBASIC8.43□□□□□ -1.06
APOBP04114 FOS-205ENST00000555242 629 ntTSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
APOBP04114 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 AC245369.8-201ENST00000636589 306 ntBASIC8.43□□□□□ -1.06
APOBP04114 AC245140.2-201ENST00000624054 1939 ntBASIC8.43□□□□□ -1.06
APOBP04114 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 AL356583.1-201ENST00000398739 1371 ntBASIC8.43□□□□□ -1.06
APOBP04114 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 MTHFD2P7-201ENST00000483867 983 ntBASIC8.43□□□□□ -1.06
APOBP04114 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC8.43□□□□□ -1.06
APOBP04114 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC8.43□□□□□ -1.06
APOBP04114 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC8.43□□□□□ -1.06
APOBP04114 IGHV3OR16-11-201ENST00000565524 349 ntBASIC8.43□□□□□ -1.06
APOBP04114 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
APOBP04114 AC116036.2-201ENST00000607592 462 ntBASIC8.43□□□□□ -1.06
APOBP04114 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC8.43□□□□□ -1.06
APOBP04114 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms