Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LTAP01374 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.73□□□□□ -0.69
LTAP01374 AC003958.1-201ENST00000435883 421 ntBASIC10.73□□□□□ -0.69
LTAP01374 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.73□□□□□ -0.69
LTAP01374 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 AC004967.1-201ENST00000453589 447 ntBASIC10.73□□□□□ -0.69
LTAP01374 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.73□□□□□ -0.69
LTAP01374 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 AC106820.3-201ENST00000561653 397 ntBASIC10.73□□□□□ -0.69
LTAP01374 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.73□□□□□ -0.69
LTAP01374 AC009486.1-201ENST00000569860 813 ntBASIC10.73□□□□□ -0.69
LTAP01374 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.73□□□□□ -0.69
LTAP01374 AC021016.3-201ENST00000608367 477 ntBASIC10.73□□□□□ -0.69
LTAP01374 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LTAP01374 AL590824.1-201ENST00000403828 1349 ntBASIC10.73□□□□□ -0.69
LTAP01374 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
LTAP01374 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 AC007952.5-201ENST00000572818 1486 ntBASIC10.73□□□□□ -0.69
LTAP01374 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.72□□□□□ -0.69
LTAP01374 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.72□□□□□ -0.69
LTAP01374 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.72□□□□□ -0.69
LTAP01374 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
LTAP01374 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.72□□□□□ -0.69
LTAP01374 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 TMEM261P1-201ENST00000604899 340 ntBASIC10.72□□□□□ -0.69
LTAP01374 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms