Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HSPA8P5-201ENST00000456928 2069 ntBASIC14.35□□□□□ -0.11
GPC4O75487 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.34□□□□□ -0.11
GPC4O75487 BTBD6P1-201ENST00000412176 1267 ntBASIC14.34□□□□□ -0.11
GPC4O75487 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC4O75487 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC4O75487 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 AC100827.2-201ENST00000563214 1194 ntBASIC14.34□□□□□ -0.11
GPC4O75487 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC4O75487 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 AL096828.3-201ENST00000615354 462 ntBASIC14.34□□□□□ -0.11
GPC4O75487 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GPC4O75487 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.34□□□□□ -0.11
GPC4O75487 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC4O75487 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC4O75487 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC4O75487 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.33□□□□□ -0.11
GPC4O75487 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.33□□□□□ -0.11
GPC4O75487 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GPC4O75487 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
GPC4O75487 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC4O75487 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.33□□□□□ -0.12
GPC4O75487 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GPC4O75487 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC4O75487 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC4O75487 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC4O75487 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms