Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00473A8K010 AC092580.1-201ENST00000433998 658 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 OR2R1P-201ENST00000441404 914 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 AC234783.1-201ENST00000441761 496 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 AC106886.1-201ENST00000568660 600 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 MIR4741-201ENST00000579822 90 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 MIR3197-201ENST00000582241 73 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 AC105233.6-201ENST00000642093 218 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00473A8K010 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00473A8K010 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 SHMT1P1-201ENST00000419974 1312 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 LINC00115-201ENST00000473798 1317 ntBASIC11.59□□□□□ -0.55
LINC00473A8K010 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00473A8K010 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00473A8K010 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00473A8K010 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00473A8K010 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00473A8K010 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00473A8K010 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC00473A8K010 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00473A8K010 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00473A8K010 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00473A8K010 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00473A8K010 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 AL512343.1-201ENST00000605837 169 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00473A8K010 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00473A8K010 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00473A8K010 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00473A8K010 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00473A8K010 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00473A8K010 SALL4P6-201ENST00000429385 1691 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00473A8K010 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 AP002353.1-201ENST00000528257 1599 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 AHCYP4-201ENST00000419201 1315 ntBASIC11.58□□□□□ -0.56
LINC00473A8K010 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00473A8K010 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms