Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AL132655.2-201ENST00000596276 594 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AC008825.2-201ENST00000603374 718 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AC134312.5-201ENST00000568031 1313 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AC010970.1-201ENST00000445125 1848 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 C2-206ENST00000442278 2434 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 BAATP1-201ENST00000412284 1225 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 KRT18P15-201ENST00000458108 1291 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ABBA01031660.1-201ENST00000635219 756 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AC007541.1-201ENST00000570282 1469 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 MSNP1-201ENST00000511640 1732 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms