Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC079178.1-201ENST00000420915 656 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC026954.1-201ENST00000429771 1293 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC104989.1-201ENST00000519711 778 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC100827.2-201ENST00000563214 1194 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC021016.3-201ENST00000608367 477 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 MIR6720-201ENST00000611664 98 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AL157996.1-201ENST00000624684 2299 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 FAM95B1-212ENST00000592873 4692 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC111170.3-201ENST00000624282 2464 ntBASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR1DQ9Y2S0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 DUX4L46-201ENST00000566845 751 ntBASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 LINC02084-201ENST00000606069 1096 ntBASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AL008718.2-201ENST00000609206 1313 ntBASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms