Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 KRT18P33-201ENST00000398525 1043 ntBASIC18.93■□□□□ 0.62
PHF8Q9UPP1 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 CDK4P1-201ENST00000454213 828 ntBASIC18.93■□□□□ 0.62
PHF8Q9UPP1 DPY19L2P4-201ENST00000479881 442 ntBASIC18.93■□□□□ 0.62
PHF8Q9UPP1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 PMEL-214ENST00000550447 901 ntTSL 3 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AC023824.1-201ENST00000562945 2975 ntBASIC18.93■□□□□ 0.62
PHF8Q9UPP1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AC103702.1-201ENST00000548801 2630 ntBASIC18.93■□□□□ 0.62
PHF8Q9UPP1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AHCYP3-201ENST00000420053 1279 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 PEBP1P3-201ENST00000455475 548 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AP000533.1-201ENST00000456143 1177 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 RN7SL578P-201ENST00000477781 283 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 RNA5SP420-201ENST00000516997 137 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SRPK2P-201ENST00000523408 1100 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AC132812.1-201ENST00000583145 892 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AL139424.3-202ENST00000641619 917 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 AC113367.3-201ENST00000508316 1912 ntBASIC18.92■□□□□ 0.62
PHF8Q9UPP1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PHF8Q9UPP1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 NRADDP-202ENST00000641269 1585 ntBASIC18.91■□□□□ 0.62
PHF8Q9UPP1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 FDPSP7-201ENST00000429043 1054 ntBASIC18.91■□□□□ 0.62
PHF8Q9UPP1 MAGEA7P-201ENST00000436482 942 ntBASIC18.91■□□□□ 0.62
PHF8Q9UPP1 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 RPL29P2-201ENST00000488409 460 ntBASIC18.91■□□□□ 0.62
PHF8Q9UPP1 MBP-230ENST00000528160 584 ntTSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 BNIP3P41-202ENST00000616656 861 ntBASIC18.91■□□□□ 0.62
PHF8Q9UPP1 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PHF8Q9UPP1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms