Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 AC011474.4-201ENST00000623523 2076 ntBASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 PSAT1P2-201ENST00000426107 972 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 COQ10BP2-201ENST00000513804 724 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 CES1P2-201ENST00000566467 1242 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 SNX18-202ENST00000343017 3140 ntBASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNB3Q8WWL7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 MIR1301-201ENST00000408518 82 ntBASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 AC063952.3-201ENST00000467756 308 ntBASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNB3Q8WWL7 ABCD1P4-201ENST00000399687 604 ntBASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 KRT18P4-201ENST00000422599 1288 ntBASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 AL136982.5-201ENST00000605222 294 ntBASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNB3Q8WWL7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms