Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AC078875.1-201ENST00000431907 724 ntBASIC13.34□□□□□ -0.27
NUP43Q8NFH3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AC106794.1-201ENST00000506935 792 ntBASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 SNORD3B-2-202ENST00000571722 791 ntBASIC13.34□□□□□ -0.27
NUP43Q8NFH3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP43Q8NFH3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 DPM3-202ENST00000368399 517 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC061965.1-201ENST00000560524 1465 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC073548.1-201ENST00000624088 1882 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 SHMT1P1-201ENST00000419974 1312 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 AC018735.1-201ENST00000437208 1502 ntBASIC13.33□□□□□ -0.28
NUP43Q8NFH3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP43Q8NFH3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AL365181.3-201ENST00000605886 3222 ntBASIC13.32□□□□□ -0.28
NUP43Q8NFH3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms