Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC026434.2-201ENST00000506094 1078 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC068587.3-201ENST00000526613 355 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC131206.1-201ENST00000538078 1211 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 MIR5189-201ENST00000577370 114 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 KRT18P8-201ENST00000581937 1246 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AL133445.2-201ENST00000611191 527 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 BX539320.1-201ENST00000623759 877 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 PTPRVP-205ENST00000641549 5067 ntBASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.41□□□□□ -0.26
DEPDC4Q8N2C3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AC005229.1-201ENST00000392885 409 ntBASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AC117500.1-201ENST00000497352 755 ntBASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AC104989.1-201ENST00000519711 778 ntBASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AP001582.1-201ENST00000525856 295 ntBASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 AL512343.1-201ENST00000605837 169 ntBASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEPDC4Q8N2C3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
DEPDC4Q8N2C3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
DEPDC4Q8N2C3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEPDC4Q8N2C3 AC134312.5-201ENST00000568031 1313 ntBASIC13.39□□□□□ -0.27
DEPDC4Q8N2C3 CSPG4P11-201ENST00000560634 4910 ntBASIC13.39□□□□□ -0.27
DEPDC4Q8N2C3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms