Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 AL590824.1-201ENST00000403828 1349 ntBASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM71Q2Q1W2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 AL139158.3-201ENST00000641212 1562 ntBASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIM71Q2Q1W2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 GEMIN8P4-201ENST00000380526 729 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 ACTBP7-201ENST00000418351 1124 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AP001527.2-201ENST00000614441 631 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AC073869.4-201ENST00000620841 800 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AC126755.5-201ENST00000622756 267 ntBASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIM71Q2Q1W2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AP000244.1-201ENST00000424582 201 ntBASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AL512599.1-201ENST00000430724 685 ntBASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM71Q2Q1W2 AC023968.2-201ENST00000560593 1049 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms