Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.75□□□□□ -0.21
PCDH1Q08174 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDH1Q08174 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDH1Q08174 AC104073.2-201ENST00000453737 312 ntBASIC13.75□□□□□ -0.21
PCDH1Q08174 SERPINA13P-202ENST00000478994 924 ntBASIC13.75□□□□□ -0.21
PCDH1Q08174 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.75□□□□□ -0.21
PCDH1Q08174 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 MIR3188-201ENST00000583494 85 ntBASIC13.75□□□□□ -0.21
PCDH1Q08174 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 AC089987.1-201ENST00000551654 2209 ntBASIC13.75□□□□□ -0.21
PCDH1Q08174 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 AL928654.5-201ENST00000624831 2501 ntBASIC13.74□□□□□ -0.21
PCDH1Q08174 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 NCLP1-201ENST00000445357 1963 ntBASIC13.74□□□□□ -0.21
PCDH1Q08174 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.74□□□□□ -0.21
PCDH1Q08174 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PCDH1Q08174 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.74□□□□□ -0.21
PCDH1Q08174 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.74□□□□□ -0.21
PCDH1Q08174 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.74□□□□□ -0.21
PCDH1Q08174 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
PCDH1Q08174 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 MIR3615-201ENST00000581999 87 ntBASIC13.74□□□□□ -0.21
PCDH1Q08174 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
PCDH1Q08174 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 AC015909.5-201ENST00000624336 2266 ntBASIC13.74□□□□□ -0.21
PCDH1Q08174 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDH1Q08174 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDH1Q08174 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.73□□□□□ -0.21
PCDH1Q08174 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
PCDH1Q08174 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.73□□□□□ -0.21
PCDH1Q08174 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCDH1Q08174 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 LINC00115-201ENST00000473798 1317 ntBASIC13.73□□□□□ -0.21
PCDH1Q08174 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.73□□□□□ -0.21
PCDH1Q08174 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PCDH1Q08174 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PCDH1Q08174 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.73□□□□□ -0.21
PCDH1Q08174 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
PCDH1Q08174 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDH1Q08174 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms