Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AL021155.1-201ENST00000438808 2637 ntBASIC13□□□□□ -0.33
CXCR4P61073 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AC106818.1-201ENST00000623223 3242 ntBASIC13□□□□□ -0.33
CXCR4P61073 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 SHC1P1-201ENST00000425230 1745 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CXCR4P61073 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.99□□□□□ -0.33
CXCR4P61073 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 AC245100.3-201ENST00000441281 285 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 SPTLC1P1-201ENST00000447199 261 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CXCR4P61073 AC022137.2-201ENST00000503482 481 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.99□□□□□ -0.33
CXCR4P61073 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.99□□□□□ -0.33
CXCR4P61073 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.99□□□□□ -0.33
CXCR4P61073 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 AL132655.2-201ENST00000596276 594 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.99□□□□□ -0.33
CXCR4P61073 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CXCR4P61073 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 AC015819.3-201ENST00000624305 2674 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCR4P61073 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CXCR4P61073 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CXCR4P61073 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.99□□□□□ -0.33
CXCR4P61073 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCR4P61073 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CXCR4P61073 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CXCR4P61073 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CXCR4P61073 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 FKBP4P6-201ENST00000457486 1332 ntBASIC12.98□□□□□ -0.33
CXCR4P61073 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCR4P61073 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCR4P61073 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms