Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 AL031595.1-201ENST00000623969 4709 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S2P56377 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S2P56377 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP1S2P56377 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S2P56377 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 RN7SKP214-201ENST00000364208 315 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP1S2P56377 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 ACTBP11-201ENST00000436287 1126 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 EIF4HP1-201ENST00000453115 687 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.86□□□□□ -0.19
AP1S2P56377 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S2P56377 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 AC093752.3-201ENST00000567343 901 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 MIR3615-201ENST00000581999 87 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.86□□□□□ -0.19
AP1S2P56377 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP1S2P56377 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 AC015909.5-201ENST00000624336 2266 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.86□□□□□ -0.19
AP1S2P56377 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
AP1S2P56377 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 KRT8P21-201ENST00000430398 1491 ntBASIC13.86□□□□□ -0.19
AP1S2P56377 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S2P56377 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
AP1S2P56377 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S2P56377 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
AP1S2P56377 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.85□□□□□ -0.19
AP1S2P56377 NKAIN1P1-201ENST00000435754 582 ntBASIC13.85□□□□□ -0.19
AP1S2P56377 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S2P56377 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.85□□□□□ -0.19
AP1S2P56377 RN7SL530P-201ENST00000485097 298 ntBASIC13.85□□□□□ -0.19
AP1S2P56377 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S2P56377 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.85□□□□□ -0.19
AP1S2P56377 AC138649.2-201ENST00000615886 705 ntBASIC13.85□□□□□ -0.19
AP1S2P56377 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S2P56377 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
AP1S2P56377 DMBT1P1-203ENST00000636837 4628 ntBASIC13.85□□□□□ -0.19
AP1S2P56377 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S2P56377 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
AP1S2P56377 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S2P56377 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S2P56377 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP1S2P56377 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP1S2P56377 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP1S2P56377 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP1S2P56377 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.84□□□□□ -0.19
AP1S2P56377 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
AP1S2P56377 AL139158.3-201ENST00000641212 1562 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms