Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.64□□□□□ -0.39
LHX2P50458 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LHX2P50458 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LHX2P50458 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 OR5BD1P-201ENST00000532527 817 ntBASIC12.64□□□□□ -0.39
LHX2P50458 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.64□□□□□ -0.39
LHX2P50458 HERC2P11-201ENST00000562845 725 ntBASIC12.64□□□□□ -0.39
LHX2P50458 AC100756.2-201ENST00000569537 736 ntBASIC12.64□□□□□ -0.39
LHX2P50458 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 AL157996.1-201ENST00000624684 2299 ntBASIC12.64□□□□□ -0.39
LHX2P50458 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 AC004554.1-201ENST00000422830 1468 ntBASIC12.64□□□□□ -0.39
LHX2P50458 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.64□□□□□ -0.39
LHX2P50458 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.64□□□□□ -0.39
LHX2P50458 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.64□□□□□ -0.39
LHX2P50458 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LHX2P50458 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LHX2P50458 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
LHX2P50458 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.63□□□□□ -0.39
LHX2P50458 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.63□□□□□ -0.39
LHX2P50458 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LHX2P50458 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
LHX2P50458 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.63□□□□□ -0.39
LHX2P50458 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
LHX2P50458 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.63□□□□□ -0.39
LHX2P50458 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.63□□□□□ -0.39
LHX2P50458 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LHX2P50458 RPL18AP3-201ENST00000462885 528 ntBASIC12.63□□□□□ -0.39
LHX2P50458 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.63□□□□□ -0.39
LHX2P50458 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LHX2P50458 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.63□□□□□ -0.39
LHX2P50458 DNM1P30-201ENST00000563586 452 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms