Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4P46934 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NEDD4P46934 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.64■□□□□ 0.25
NEDD4P46934 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4P46934 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.64■□□□□ 0.25
NEDD4P46934 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4P46934 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NEDD4P46934 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.64■□□□□ 0.25
NEDD4P46934 PPP1R2P4-201ENST00000424051 595 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 AK2P2-201ENST00000439142 405 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.64■□□□□ 0.25
NEDD4P46934 RPL18AP8-201ENST00000486071 528 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 RNA5SP423-201ENST00000517127 109 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4P46934 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.64■□□□□ 0.25
NEDD4P46934 AC106872.11-201ENST00000605838 421 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4P46934 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4P46934 AC061965.1-201ENST00000560524 1465 ntBASIC16.64■□□□□ 0.25
NEDD4P46934 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NEDD4P46934 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4P46934 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NEDD4P46934 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.63■□□□□ 0.25
NEDD4P46934 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.63■□□□□ 0.25
NEDD4P46934 EEF1DP6-201ENST00000449232 372 ntBASIC16.63■□□□□ 0.25
NEDD4P46934 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.63■□□□□ 0.25
NEDD4P46934 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.63■□□□□ 0.25
NEDD4P46934 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 PRKXP1-201ENST00000561423 1122 ntBASIC16.63■□□□□ 0.25
NEDD4P46934 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4P46934 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4P46934 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4P46934 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 AC008620.2-201ENST00000510294 1569 ntBASIC16.62■□□□□ 0.25
NEDD4P46934 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4P46934 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEDD4P46934 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 AL627231.1-201ENST00000394467 1125 ntBASIC16.62■□□□□ 0.25
NEDD4P46934 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.62■□□□□ 0.25
NEDD4P46934 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.62■□□□□ 0.25
NEDD4P46934 AC098934.1-203ENST00000442868 1262 ntBASIC16.62■□□□□ 0.25
NEDD4P46934 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.62■□□□□ 0.25
NEDD4P46934 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.62■□□□□ 0.25
NEDD4P46934 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NEDD4P46934 RN7SL665P-201ENST00000578793 300 ntBASIC16.62■□□□□ 0.25
NEDD4P46934 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4P46934 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NEDD4P46934 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.62■□□□□ 0.25
NEDD4P46934 FMO6P-201ENST00000236166 1620 ntBASIC16.62■□□□□ 0.25
NEDD4P46934 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4P46934 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4P46934 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NEDD4P46934 AC015909.5-201ENST00000624336 2266 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms