Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SDCBP2P1-201ENST00000416115 614 ntBASIC14.29□□□□□ -0.12
LTBRP36941 AC113398.1-201ENST00000464124 406 ntBASIC14.29□□□□□ -0.12
LTBRP36941 RPL29P2-202ENST00000498671 657 ntBASIC14.29□□□□□ -0.12
LTBRP36941 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBRP36941 CCNL2P1-201ENST00000512846 969 ntBASIC14.29□□□□□ -0.12
LTBRP36941 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBRP36941 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBRP36941 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBRP36941 AC133555.4-201ENST00000569081 152 ntBASIC14.29□□□□□ -0.12
LTBRP36941 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBRP36941 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 AC008622.3-201ENST00000621170 600 ntBASIC14.29□□□□□ -0.12
LTBRP36941 AC148476.1-201ENST00000622182 705 ntBASIC14.29□□□□□ -0.12
LTBRP36941 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 KRT8P42-201ENST00000405771 1399 ntBASIC14.29□□□□□ -0.12
LTBRP36941 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBRP36941 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBRP36941 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBRP36941 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
LTBRP36941 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 AC090505.1-201ENST00000430515 1834 ntBASIC14.28□□□□□ -0.12
LTBRP36941 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.28□□□□□ -0.12
LTBRP36941 AC104115.1-201ENST00000484005 623 ntBASIC14.28□□□□□ -0.12
LTBRP36941 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.28□□□□□ -0.12
LTBRP36941 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBRP36941 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBRP36941 RN7SL300P-201ENST00000582522 318 ntBASIC14.28□□□□□ -0.12
LTBRP36941 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LTBRP36941 AC011477.7-201ENST00000617163 1440 ntBASIC14.28□□□□□ -0.12
LTBRP36941 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LTBRP36941 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBRP36941 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBRP36941 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LTBRP36941 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LTBRP36941 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBRP36941 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBRP36941 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
LTBRP36941 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBRP36941 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LTBRP36941 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBRP36941 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBRP36941 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms