Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
USP6P35125 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
USP6P35125 SNORA57-201ENST00000383870 149 ntBASIC18.69■□□□□ 0.58
USP6P35125 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.69■□□□□ 0.58
USP6P35125 AC010086.2-201ENST00000428616 226 ntBASIC18.69■□□□□ 0.58
USP6P35125 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC18.69■□□□□ 0.58
USP6P35125 RNA5SP420-201ENST00000516997 137 ntBASIC18.69■□□□□ 0.58
USP6P35125 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.69■□□□□ 0.58
USP6P35125 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC18.69■□□□□ 0.58
USP6P35125 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.69■□□□□ 0.58
USP6P35125 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.69■□□□□ 0.58
USP6P35125 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP6P35125 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6P35125 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
USP6P35125 AC245140.2-201ENST00000624054 1939 ntBASIC18.69■□□□□ 0.58
USP6P35125 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
USP6P35125 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 AC027612.2-202ENST00000445955 1199 ntBASIC18.68■□□□□ 0.58
USP6P35125 AC113347.2-201ENST00000512350 279 ntBASIC18.68■□□□□ 0.58
USP6P35125 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 MEP1AP1-201ENST00000636082 1097 ntBASIC18.68■□□□□ 0.58
USP6P35125 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6P35125 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USP6P35125 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6P35125 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP6P35125 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 NQO2-204ENST00000380454 851 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6P35125 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6P35125 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.67■□□□□ 0.58
USP6P35125 AC092612.1-201ENST00000514501 998 ntBASIC18.67■□□□□ 0.58
USP6P35125 MIR2278-201ENST00000516344 96 ntBASIC18.67■□□□□ 0.58
USP6P35125 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.67■□□□□ 0.58
USP6P35125 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 BMF-206ENST00000558774 671 ntTSL 3 BASIC18.67■□□□□ 0.58
USP6P35125 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.67■□□□□ 0.58
USP6P35125 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC18.67■□□□□ 0.58
USP6P35125 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 AC106881.1-201ENST00000605849 3329 ntBASIC18.67■□□□□ 0.58
USP6P35125 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP6P35125 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms