Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 COL6A4P2-202ENST00000504443 2753 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 AC012617.1-204ENST00000586340 2305 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.03□□□□□ -0.48
COL8A2P25067 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 AL627422.1-201ENST00000434104 580 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.03□□□□□ -0.48
COL8A2P25067 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.03□□□□□ -0.48
COL8A2P25067 MIR5572-201ENST00000583188 137 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 AC092171.5-201ENST00000608012 942 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.03□□□□□ -0.48
COL8A2P25067 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 AC074138.1-201ENST00000611182 1303 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 GRK6P1-201ENST00000400595 1711 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 AC015802.1-201ENST00000588104 1449 ntBASIC12.03□□□□□ -0.48
COL8A2P25067 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
COL8A2P25067 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.02□□□□□ -0.48
COL8A2P25067 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
COL8A2P25067 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
COL8A2P25067 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
COL8A2P25067 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.02□□□□□ -0.48
COL8A2P25067 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.02□□□□□ -0.48
COL8A2P25067 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
COL8A2P25067 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
COL8A2P25067 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
COL8A2P25067 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 HSPA7-201ENST00000445535 1927 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.02□□□□□ -0.49
COL8A2P25067 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.02□□□□□ -0.49
COL8A2P25067 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COL8A2P25067 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
COL8A2P25067 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.02□□□□□ -0.49
COL8A2P25067 AC078991.1-201ENST00000437297 610 ntBASIC12.02□□□□□ -0.49
COL8A2P25067 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms