Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.39□□□□□ -0.11
XPAP23025 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 HSPA8P5-201ENST00000456928 2069 ntBASIC14.39□□□□□ -0.11
XPAP23025 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 KRT17P5-201ENST00000332088 839 ntBASIC14.39□□□□□ -0.11
XPAP23025 AL583805.1-201ENST00000391389 531 ntBASIC14.39□□□□□ -0.11
XPAP23025 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 BANF1P3-201ENST00000412556 261 ntBASIC14.39□□□□□ -0.11
XPAP23025 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.39□□□□□ -0.11
XPAP23025 RPS9P1-201ENST00000419943 583 ntBASIC14.39□□□□□ -0.11
XPAP23025 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 RPL8P2-201ENST00000430538 502 ntBASIC14.39□□□□□ -0.11
XPAP23025 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 AC234782.1-201ENST00000451950 919 ntBASIC14.39□□□□□ -0.11
XPAP23025 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.39□□□□□ -0.11
XPAP23025 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.39□□□□□ -0.11
XPAP23025 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.39□□□□□ -0.11
XPAP23025 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 KRT8P1-201ENST00000557533 1207 ntBASIC14.39□□□□□ -0.11
XPAP23025 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.39□□□□□ -0.11
XPAP23025 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.39□□□□□ -0.11
XPAP23025 AC012617.1-204ENST00000586340 2305 ntBASIC14.39□□□□□ -0.11
XPAP23025 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
XPAP23025 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.39□□□□□ -0.11
XPAP23025 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
XPAP23025 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
XPAP23025 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
XPAP23025 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.38□□□□□ -0.11
XPAP23025 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
XPAP23025 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.38□□□□□ -0.11
XPAP23025 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 AL592076.1-201ENST00000424448 303 ntBASIC14.38□□□□□ -0.11
XPAP23025 RPSAP15-201ENST00000448168 861 ntBASIC14.38□□□□□ -0.11
XPAP23025 RN7SL67P-201ENST00000492147 296 ntBASIC14.38□□□□□ -0.11
XPAP23025 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.38□□□□□ -0.11
XPAP23025 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 AL512310.5-201ENST00000551999 515 ntBASIC14.38□□□□□ -0.11
XPAP23025 RHOQP1-201ENST00000555758 579 ntBASIC14.38□□□□□ -0.11
XPAP23025 MIR3907-201ENST00000579424 151 ntBASIC14.38□□□□□ -0.11
XPAP23025 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.38□□□□□ -0.11
XPAP23025 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
XPAP23025 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms